Internal:PODM 4D

Documentation

1. Read PODM4D paper (TODO: ½ Done)
2. Write a proper README.md file✔
3. Write a summary of PODM4D for SURA proposal:
   1. Extracted the content of PODM4D paper for SURA proposal✔
   2. Add algorithm details as it was done in the 3D case✔
4. Create Documentation of PODM 4D for Medical Image Computing and Computational Nuclear Femptography (TODO)

Execution examples

1. Heart4DChar (Panos’ data)✔
2. Heart4D-0x (x ε [1,5]) (Panos’ data)✔
3. Sphere4D-D1xD2xD3xD4 (Di ε [3, 100]) (Panos’ data)✔
4. HyperCube-sideLength=l (l=5,10) (generated by SIDG)✔

Functionality

Apply past commits of PODM3D to PODM4D where applicable (TODO: ¾ Done):

1. Restructure repository of PODM4D based on Software engineering standards✔
2. Add CLI11 command-line parser✔
3. Decouple Args from PODM✔
4. Create setArguments function✔
5. Create setInputImage(ImageType::Pointer)✔
6. Remove IOs from PODM✔
7. Separate the interface, the IOs and the filters from PODM✔
8. Add verbosity flag to control output text✔
9. Create threading pinning flag✔
10. Create memory limit flag✔
11. Remove unused defined flags✔
12. Create a function that checks if the CPU is hyperthreaded✔
13. Compute the amount of cores/blades/nodes in order to make them work for docker✔
14. Add Image Segmentation ✔
15. Set a warning if delta > min-spacing * min-dimension-size / 5✔
16. Add Linear Interpolation (TODO: Need to Implement MeshIO for 4D Meshes)
17. Create setSizingFunction(image, minimumElementEdgeSize, elementWeightLimit) (TODO)
18. Fix the null pointer to cell of vertex issue if NO_GOOD_ANGLES flag is not defined (TODO)

Adaptivity

Implementation of Sizing Function

1. Create an extra Rule which will be a user-defined sizing-function that gets a tetrahedron when all rules are met (TODO)

Visualization

http://www.qhull.org

Production Stage

Set it up on Docker, as it was done in PODM3D (TODO)