Internal:PODM 4D: Difference between revisions

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CNF, external, internal
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Spyridon97 (talk | contribs)
CNF, external, internal
2,385 edits
No edit summary
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# HyperCube-sideLength=l (l=5,10) (generated by SIDG)✔
# HyperCube-sideLength=l (l=5,10) (generated by SIDG)✔


=Functionality=
=Code Changes=
Apply past commits of PODM3D to PODM4D where applicable (TODO: ¾ Done):
Apply past commits of PODM3D to PODM4D where applicable (TODO: ¾ Done):
# Restructure repository of PODM4D based on Software engineering standards✔
# Restructure repository of PODM4D based on Software engineering standards✔
# Add CLI11 command-line parser✔
# Add CLI11 command-line parser✔
# Decouple Args from PODM✔
# Decouple Args from PODM✔
# Document defined flags✔
# Remove unused defined flags✔
# Create setArguments function✔
# Create setArguments function✔
# Create setInputImage(ImageType::Pointer)✔
# Create setInputImage(ImageType::Pointer)✔
Line 27: Line 29:
# Create threading pinning flag✔
# Create threading pinning flag✔
# Create memory limit flag✔
# Create memory limit flag✔
# Remove unused defined flags✔
# Create a function that checks if the CPU is hyperthreaded (it might be used in the future)✔
# Create a function that checks if the CPU is hyperthreaded✔
# Compute the amount of cores/blades/nodes in order to make them work for docker✔
# Compute the amount of cores/blades/nodes in order to make them work for docker✔
# Add Image Segmentation ✔
# Add Image Segmentation ✔

Revision as of 14:04, 19 February 2020

Documentation

  1. Read PODM4D paper (TODO: ½ Done)
  2. Write a proper README.md file✔
  3. Write a summary of PODM4D for SURA proposal:
    1. Extracted the content of PODM4D paper for SURA proposal✔
    2. Add algorithm details as it was done in the 3D case✔
  4. Create Documentation of PODM 4D for Medical Image Computing and Computational Nuclear Femptography (TODO)

Execution examples

  1. Heart4DChar (Panos’ data)✔
  2. Heart4D-0x (x ε [1,5]) (Panos’ data)✔
  3. Sphere4D-D1xD2xD3xD4 (Di ε [3, 100]) (Panos’ data)✔
  4. HyperCube-sideLength=l (l=5,10) (generated by SIDG)✔

Code Changes

Apply past commits of PODM3D to PODM4D where applicable (TODO: ¾ Done):

  1. Restructure repository of PODM4D based on Software engineering standards✔
  2. Add CLI11 command-line parser✔
  3. Decouple Args from PODM✔
  4. Document defined flags✔
  5. Remove unused defined flags✔
  6. Create setArguments function✔
  7. Create setInputImage(ImageType::Pointer)✔
  8. Remove IOs from PODM✔
  9. Separate the interface, the IOs and the filters from PODM✔
  10. Add verbosity flag to control output text✔
  11. Create threading pinning flag✔
  12. Create memory limit flag✔
  13. Create a function that checks if the CPU is hyperthreaded (it might be used in the future)✔
  14. Compute the amount of cores/blades/nodes in order to make them work for docker✔
  15. Add Image Segmentation ✔
  16. Set a warning if delta > min-spacing * min-dimension-size / 5✔
  17. Add Linear Interpolation (TODO: Need to Implement MeshIO for 4D Meshes)
  18. Implement a sizing function that will work as an extra rule and it will use the point indices of the pentatope that is tested (TODO)
  19. Fix the null pointer to cell of vertex issue if NO_GOOD_ANGLES flag is not defined (TODO)

Visualization

  1. Explore the ways that qhull is reducing the dimensionality of n-dimensional meshes (TODO)

Production Stage

Set it up on Docker, as it was done in PODM3D (TODO)

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