Difference between revisions of "Medical Imaging Example Meshes"

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[[File:Knee-Char,d=1.5,grading.png|500px|Knee-Char,d=1.5,grading.png]]
 
[[File:Knee-Char,d=1.5,grading.png|500px|Knee-Char,d=1.5,grading.png]]
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=Big-Brain=
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[https://odu.box.com/s/jjsb3umvqf19xtzv3zlcmexuqfaq1frt Input Image]
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Generated mesh with delta = 5, [https://odu.box.com/s/08v512e89woeiwdmrgi4wphh0f3njgt4 Output Mesh]
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<pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Big-Brain.mha --delta 5 --output ./Big-Brain,d=2.vtk</pre>
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[[File:Big-Brain,d=2.png|500px|Big-Brain,d=2.png]]
  
 
=Ircad2-Removed-Tissues=  
 
=Ircad2-Removed-Tissues=  

Revision as of 21:29, 17 February 2020

Head-Neck

Input Image

Generated mesh with delta = 2, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 2 --output ./Head-Neck,d=2.vtk

Head-Neck,d=2.png

Generated mesh with delta = 1.5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=1.5.vtk

Head-Neck,d=1.5.png

Brain-With-Tumor-Case17

Input Image

Generated mesh with delta = 1,5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --output ./Brain-With-Tumor-Case17,d=1.5.vtk

Brain-With-Tumor-Case17,d=1.5.png

Generated mesh with delta = 1.5 and volume-grading, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --volume-grading --output ./Brain-With-Tumor-Case17,d=1.5,grading.vtk

Brain-With-Tumor-Case17,d=1.5,grading.png

Knee-Char

Input Image

Generated mesh with delta = 1,5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Knee-Char.mha --delta 1.5 --output ./Knee-Char,d=1.5.vtk

Knee-Char,d=1.5.png

Generated mesh with delta = 1.5 and volume-grading, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Knee-Char.mha --delta 1.5 --volume-grading --output ./Knee-Char,d=1.5,grading.vtk

Knee-Char,d=1.5,grading.png

Big-Brain

Input Image

Generated mesh with delta = 5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Big-Brain.mha --delta 5 --output ./Big-Brain,d=2.vtk

Big-Brain,d=2.png

Ircad2-Removed-Tissues

Input Image

Generated mesh with delta = 5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk

Ircad2-Removed-Tissues,d=5.png