Difference between revisions of "Medical Imaging Example Meshes"
From crtc.cs.odu.edu
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[[File:Knee-Char,d=1.5,grading.png|500px|Knee-Char,d=1.5,grading.png]] | [[File:Knee-Char,d=1.5,grading.png|500px|Knee-Char,d=1.5,grading.png]] | ||
+ | |||
+ | =Big-Brain= | ||
+ | [https://odu.box.com/s/jjsb3umvqf19xtzv3zlcmexuqfaq1frt Input Image] | ||
+ | |||
+ | Generated mesh with delta = 5, [https://odu.box.com/s/08v512e89woeiwdmrgi4wphh0f3njgt4 Output Mesh] | ||
+ | <pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Big-Brain.mha --delta 5 --output ./Big-Brain,d=2.vtk</pre> | ||
+ | |||
+ | [[File:Big-Brain,d=2.png|500px|Big-Brain,d=2.png]] | ||
=Ircad2-Removed-Tissues= | =Ircad2-Removed-Tissues= |
Revision as of 21:29, 17 February 2020
Head-Neck
Generated mesh with delta = 2, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 2 --output ./Head-Neck,d=2.vtk
Generated mesh with delta = 1.5, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=1.5.vtk
Brain-With-Tumor-Case17
Generated mesh with delta = 1,5, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --output ./Brain-With-Tumor-Case17,d=1.5.vtk
Generated mesh with delta = 1.5 and volume-grading, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --volume-grading --output ./Brain-With-Tumor-Case17,d=1.5,grading.vtk
Knee-Char
Generated mesh with delta = 1,5, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Knee-Char.mha --delta 1.5 --output ./Knee-Char,d=1.5.vtk
Generated mesh with delta = 1.5 and volume-grading, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Knee-Char.mha --delta 1.5 --volume-grading --output ./Knee-Char,d=1.5,grading.vtk
Big-Brain
Generated mesh with delta = 5, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Big-Brain.mha --delta 5 --output ./Big-Brain,d=2.vtk
Ircad2-Removed-Tissues
Generated mesh with delta = 5, Output Mesh
docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk