Difference between revisions of "Medical Imaging Example Meshes"

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(→‎Head-Neck)
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[[File:Head-Neck,d=1.5.png|500px|Head-Neck,d=1.5.png]]
 
[[File:Head-Neck,d=1.5.png|500px|Head-Neck,d=1.5.png]]
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=Ircad2-Removed-Tissues=
 
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[https://odu.box.com/s/01bxjptf4grfuvxj3a9g6frfosyu6dbt Input Image]
 
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Generated mesh with delta = 5, [https://odu.box.com/s/7kgv263qvebk55077nny4l2n7ienpahf Output Mesh]
 
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<pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk</pre>
 
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[[File:Ircad2-Removed-Tissues,d=5.png|500px|Ircad2-Removed-Tissues,d=5.png]]
 
  
 
=Brain-With-Tumor-Case17=
 
=Brain-With-Tumor-Case17=
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[[File:Brain-With-Tumor-Case17,d=1.5,grading.png|500px|Brain-With-Tumor-Case17,d=1.5,grading.png]]
 
[[File:Brain-With-Tumor-Case17,d=1.5,grading.png|500px|Brain-With-Tumor-Case17,d=1.5,grading.png]]
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=Ircad2-Removed-Tissues=
 +
[https://odu.box.com/s/01bxjptf4grfuvxj3a9g6frfosyu6dbt Input Image]
 +
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Generated mesh with delta = 5, [https://odu.box.com/s/7kgv263qvebk55077nny4l2n7ienpahf Output Mesh]
 +
<pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk</pre>
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[[File:Ircad2-Removed-Tissues,d=5.png|500px|Ircad2-Removed-Tissues,d=5.png]]

Revision as of 18:42, 17 February 2020

Head-Neck

Input Image

Generated mesh with delta = 2, Output Mesh 

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 2 --output ./Head-Neck,d=2.vtk

Head-Neck,d=2.png

Generated mesh with delta = 1.5, Output Mesh 

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=1.5.vtk

Head-Neck,d=1.5.png

Brain-With-Tumor-Case17

Input Image

Generated mesh with delta = 1,5, Output Mesh 

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --output ./Brain-With-Tumor-Case17,d=1.5.vtk

Brain-With-Tumor-Case17,d=1.5.png

Generated mesh with delta = 1.5 and volume-grading, Output Mesh 

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --volume-grading --output ./Brain-With-Tumor-Case17,d=1.5,grading.vtk

Brain-With-Tumor-Case17,d=1.5,grading.png

Ircad2-Removed-Tissues

Input Image

Generated mesh with delta = 5, Output Mesh 

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk

Ircad2-Removed-Tissues,d=5.png

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