Difference between revisions of "Medical Imaging Example Meshes"

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(Head-Neck)
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Generated mesh with delta = 1.5, [https://odu.box.com/s/sfjb83whac8rhn1ykuuxmektprxtci78 Output Mesh]
 
Generated mesh with delta = 1.5, [https://odu.box.com/s/sfjb83whac8rhn1ykuuxmektprxtci78 Output Mesh]
<pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=2.vtk</pre>
+
<pre>docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=1.5.vtk</pre>
  
 
[[File:Head-Neck,d=1.5.png|500px|Head-Neck,d=1.5.png]]
 
[[File:Head-Neck,d=1.5.png|500px|Head-Neck,d=1.5.png]]

Revision as of 18:38, 17 February 2020

Head-Neck

Input Image

Generated mesh with delta = 2, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 2 --output ./Head-Neck,d=2.vtk

Head-Neck,d=2.png

Generated mesh with delta = 1.5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Head-Neck.mha --delta 1.5 --output ./Head-Neck,d=1.5.vtk

Head-Neck,d=1.5.png

Ircad2-Removed-Tissues

Input Image

Generated mesh with delta = 5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Ircad2-Removed-Tissues.nrrd --delta 5 --output ./Ircad2-Removed-Tissues,d=5.vtk

Ircad2-Removed-Tissues,d=5.png

Brain-With-Tumor-Case17

Input Image

Generated mesh with delta = 1,5, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --output ./Brain-With-Tumor-Case17,d=1.5.vtk

Brain-With-Tumor-Case17,d=1.5.png

Generated mesh with delta = 1.5 and volume-grading, Output Mesh

docker run -v $(pwd):/data/ crtc_i2m podm3d --input ./NRL_SHARE/Brain-With-Tumor-Case17.nii --delta 1.5 --volume-grading --output ./Brain-With-Tumor-Case17,d=1.5,grading.vtk

Brain-With-Tumor-Case17,d=1.5,grading.png