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The local execution module will enable the user to run APBNRR from Slicer similarly to how the PBNRR extension works. The user will be able to provide their own custom parameters for APBNRR.
The local execution module will enable the user to run APBNRR from Slicer similarly to how the PBNRR extension works. The user will be able to provide their own custom parameters for APBNRR.
Both modules will be external.

Revision as of 09:28, 10 August 2018

PBNRR Extension

Repository: https://github.com/aangelos28/PBNRR


Status: UPLOADED


  • PBNRR running on the upcoming Slicer 4.9 release.
  • PBNRR running on the current Slicer 4.8.1 release (compiled with Qt 5 and VTK 9).

APBNRR Extension

Status: IMPLEMENTING LOCAL MODULE

I am currently in the process of the designing the APBNRR Slicer extension. At the moment, I am waiting for the feature requirements so I can integrate them into my design.

The core functionality will be carried out by two modules: a remote execution module and a local execution module.

The remote execution module will enable the user to execute my scripts for running APBNRR on Turing and later on an arbitrary cluster. Later on, the machine learning models that I have created will be used by this module for faster parameter optimization.

The local execution module will enable the user to run APBNRR from Slicer similarly to how the PBNRR extension works. The user will be able to provide their own custom parameters for APBNRR.