Internal:Metric Adaptive CDT3D: Difference between revisions

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BrainMapping, CNF, HPC, I2MConversion, NDAM, Segmentation, UltraSound3D, Bureaucrats, external, internal, Administrators
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Ctsolakis (talk | contribs)
BrainMapping, CNF, HPC, I2MConversion, NDAM, Segmentation, UltraSound3D, Bureaucrats, external, internal, Administrators
2,152 edits
Line 101: Line 101:
! Par. Reconnection
! Par. Reconnection
|-
|-
| case 1 (x5)
| x5
| 3,563,574
| 3,563,574
| 608,096
| 608,096
Line 116: Line 116:
| 2.95
| 2.95
|-
|-
| case 2 (x7)
| x7
| 9,490,845
| 9,490,845
| 1,612,343
| 1,612,343
Line 131: Line 131:
| 4.74
| 4.74
|-
|-
| case 3 (x15)
| x15
| 85,860,524
| 85,860,524
| 14,487,842
| 14,487,842
Line 146: Line 146:
| 30.89
| 30.89
|-
|-
| case (x16)
| x16
| 105,937,587
| 105,937,587
| 17,865,212
| 17,865,212

Revision as of 11:03, 11 May 2018

Preliminary data (no sorting)

All time data are given in seconds.
input scaling # Tetrahedra # Vertices Isotropic Boundary

Refinement (MMGS)

Boundary

Recovery

Mesh Refinement Total Time

(without MMGS)

Memory (GB)
# Iterations Par. Deactivation Par. Vertex Creation Vertex Insertion Partition Par. Reconnection
x8 14,094,106 2,390,948 3.04 4.93 78 7.42 12.38 5.62 82.91 238.17 352.66 6.1
x10 26,859,966 4,546,172 3.78 11.64 80 14.69 25.17 9.85 154.10 437.97 655.05 10.4
x20 209,865,483 35,344,507 25.64 169.53 276 311.71 381.31 74.69 3,781.33 9,321.10 14,045.37 74.31
x30 691,716,442 116,311,739 51.327 823.07 271 970.64 1,087.89 248.59 12,032.78 30,515.05 45,691.21 243

Preliminary data (with sorting)

All time data are given in seconds sortp=1 .
# Tetrahedra # Vertices Isotropic Boundary

Refinement (MMGS)

Boundary

Recovery

Mesh Refinement Total Time

(without MMGS)

Memory (GB)
# Iterations Par. Deactivation Par. Vertex Creation Vertex Insertion Sorting Partition Par. Reconnection
x5 3,563,574 608,096 1.11 0.93 48 1.75 2.68 1.15 12.56 14.43 59.57 93.63 2.95
x7 9,490,845 1,612,343 1.78 2.82 71 4.75 7.89 3.45 40.02 50.94 157.99 268.8 4.74
x15 85,860,524 14,487,842 10.74 60.196 86 44.88 80.90 27.86 372.75 519.68 1,267.87 2,377.63 30.89
x16 105,937,587 17,865,212 10.85 74.11 182 104.14 154.86 35.25 956.86 1331.52 2994.21 5654.6 37.86

Notes

  • Using a scaled unit cube ([0,1]3) and Polar-1 metric from UGAWG
  • No boundary adaptation,due to the increasing prepossessing time and the difficulty to recover the boundary.
  • mrecm2 needs to be disabled due to problems with inpshere falling in infinite loop
  • mrec4 needs to be on or highly anisotropic elements will not be refined ( this is due to the double flag omission of CDT3D)
  • The experiments performed on a DELL workstation with Linux Red Hat Enterprise, 24 hardware cores Intel® Xeon® CPU E5-2697v2@2.70 GHz, and 757 GB RAM
  • Using 24+24 (HyperThreading) threads
  • parameters --met=1 --meval=2 --mrecm2=1 --mrec4=1 --nadapt=0 --mpp=2 --qstatr=1 --outmesh=${NAME}.meshb --ndfs=0 --nthreads=24 --nbuckets=640 --nthreadsaf=24 --nbucketsaf=640 --blockmul=500000 --nqual=0 --nminpts=30 --ordt=1 --pardeact=1 --mdse=0
  • raw data is under crtc-gpu.cs.odu.edu:/research/ctsolakis/QCIRCLE

TO DO (shorterm)

  • Try enabling sorting ( sortp)
  • export quality to tecplot format

TO DO (long term)

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