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== Eleni, Thomas , Angelos==
== Current Students ==
[[Internal:ReportCloud | Cloud Report]]
 
=== Polykarpos ===
[[PREMA Shared Memory]]
 
[[Internal:IMR_2018_Runtime_Systems | IMR 2018 Runtime Systems]]
 
[[Intel Xeon Phi and High Bandwidth Memory]]
 
[[CNF:Machine_Learning | CNF Machine Learning Project]]


[[Internal:Preprocess_Medical_Images | Preprocessing of Medical Images]]
[[CNF:ML_Data_Denoise | Track denoising with ML]]


[[Internal:Execution_And_Evaluation_Medical_Images | Execution and Evaluation of Medical Imaging data]]
[https://docs.google.com/presentation/d/1rF3rElnBCsKR_Z_66nTCmMqSZa3b51mEzswiLz_3d3Q/edit?usp=sharing CNF HPC Workshop Slides]


== Angelos ==
[[PREMA SW4| SW4 Benchmark with PREMA]]


[[Internal:GPCD | GPCD]]
[[PDR.PODM Distributed Memory| PDR.PODM.PREMA]]


[[Internal:APBNRRExecutionStatus | APBNRR Execution Status]]
[https://www.overleaf.com/read/vgwrypshrkqp PREMA-Argobots Paper]


[[Internal:PAPBNRRComparison | Pristine vs New PAPBNRR]]
[https://olddominion-my.sharepoint.com/:b:/g/personal/pthom001_odu_edu/EYiL4h5xKThJgjyvbsFbZe4BH_4pr3rR-9x-gvErpDaq3A?e=hdy7ii Heterogeneousarchitecturesforcomputationalintensiveapplications:Acost-effectivenessanalysis]


[[Internal:APBNRRMachineLearning | APBNRR Machine Learning]]
[[Internal:TAPAS]]


[[Internal: SlicerExtensions | Slicer Extensions]]
=== Kevin ===
[[Internal:Weekly_Notes | Timetable/Primary Reports/Notes]]


== Joi ==
[[Internal:PDR_AFLR |PDR.AFLR Stability and Scalability]]
[[Tasks | Tasks ]]


[[I2M_Conversion_Tool | Image-to-Mesh (I2M) Conversion Tool]]
[[Internal:PDR_AFLR_Progress_Report |PDR.AFLR Progress Report]]


[[3D_Slicer_CBC3D_Extension | 3D Slicer CBC3D Extension ]]
[[AFLR_Point_Spacing/Distribution_Function_Parameters | AFLR Point Spacing/Distribution Function Parameters]]


== Christos ==
[[Internal:PDR_AFLR_Performance_Testing |PDR.AFLR Performance Testing]]
'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/Papers All papers]'''


'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/presentations All presentations]'''
[[Internal:PDR_AFLR_Performance_AIAA |AIAA PDR.AFLR Performance Data]]


<hr>
[[Internal:Report_Status |Old Reports]]
[https://www.overleaf.com/6438559258mdmsnbpffztx speculative meshing operations using tasks paper]


[https://olddominion-my.sharepoint.com/:b:/g/personal/nchrisoc_odu_edu/EXyZtFJEjdZV_0QJunWRbKkBvsleyOlNZFEMUB5Fbr7W2A Adaptive CDT3D paper]
[[Internal:PsC_AFLR_Performance |PsC.AFLR Performance Data]]


[https://odu.box.com/s/c7umodgo9dmknriap7820d0k5a1wkp7x Parallel Grid Adaptation Paper (UGAWG) ]
[[Internal:Next_Generation_Boundary_Layer |Next Generation Boundary Layer]]


[[Internal:Adaptive_Meshing_For_APBNRR]]
[[Internal:CDT3D_GPU_Smoothing | CDT3D GPU Smoothing]]


[[Internal:Distributed_CDT3D_Notes | Distributed CDT3D Notes]]


[[Internal:I2M_Notes | Image-to-Mesh Conversion Project Notes]]


[https://docs.google.com/presentation/d/1Fjt5PoDPXa715nOAjn0F4IJpdhscIGnlaQvweqFnB0U Adaptivity PPoSS slides]
[[Internal:Experiences_Data_CDT3D_PDR_PODM | PREMA.CDT3D and PDR.PODM Experiences Data]]


[https://docs.google.com/presentation/d/1RDtQufImuo5J1pKioIYDuTWCeX1UtjKyx7kQ2i24Tmo/edit?usp=sharing  CNF HPC slides]
=== Emmanuel ===
[[Internal:Quantum Information Science (QIS General) |Quantum Information Science (QIS General)]]


[[Internal:Quantum_Edge_Detection |Quantum Edge Detection]]


[https://git-community.cs.odu.edu/nikos/SciTech_2019/blob/draft/main.pdf Scitech Journal paper latest draft]
[[Internal:Hybrid Computing |Hybrid Computing]]


[[Internal:Quantum Machine Learning |Quantum Machine Learning]]


[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/cand_exam.pdf Candidacy exam (document)]
[[Internal:Quantum Natural Language Processing |Quantum Natural Language Processing]]
[https://olddominion-my.sharepoint.com/:p:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy_presentation.pptx  (presentation .pptx)]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy%20_presentation.pdf  (presentation pdf)]


[[Internal:Adaptive_CDT3D_Results | Metric Adaptive CDT3D results]]
=== Chris ===


[[Internal:Argobots_and_CDT3D | Argobots and CDT3D]]
[[Internal:QDist | Quantum Euclidean Distance (QDist)]]


[[Internal:4D_Predicates_Benchmark | 4D predicates benchmark]]
[[Internal:QHD | Quantum Hausdorff Distance (QHD)]]


[[CNF:Mesh Sizing for CNF data]]
[[Internal:QED | Quantum Edge Detection (QED)]]


[[Internal:DQHED |Distributed Hadamard Quantum Edge Detection (DQHED)]]


[[Internal:QNEM |Quantum Nested Expectation Maximization (QNEM)]]


[[Internal:QCED |Quantum Canny Edge Detection (QCED)]]


[[Internal:ACDT3D        | Metric Adaptive CDT3D Notes ]]
[[Internal:Quantum_PDEs |Quantum PDEs]]


[[Internal:weekly_report_rector |Weekly Report]]


=== Devon ===
[[Internal:Quantum_Clustering |Quantum Clustering]]


== Former Students ==


[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/paper.pdf Parallel Mesh Generation review paper]
=== Angelos ===


[[Internal:GPCD | GPCD]]


[https://lbpw.larc.nasa.gov/ AIAA Sonic Boom Prediction Workshop (next in 2020)]
[[Internal:APBNRRExecutionStatus | APBNRR Execution Status]]


[[Internal:CDT3D_SU2 | SU2 and grid requirements ]]
[[Internal:PAPBNRRComparison | Pristine vs New PAPBNRR]]


[[Internal:Boundary_Layer_References | Boundary Layer References ]]
[[Internal:APBNRRMachineLearning | APBNRR Machine Learning]]


[[External:Mesh_Generation_Articles_In_Journals | Some Mesh Generation Journal papers]]
[[Internal: SlicerExtensions | Slicer Extensions]]


[https://docs.google.com/document/d/1txyCu6ibheH19hi3nZ10LgHm-WzglUrT5y0AaO__VYk/edit?usp=sharing PhD Tentative Shedule]
=== Christos ===
'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/papers All papers]'''


'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/presentations All presentations]'''


[https://odu.box.com/s/sfkd5l3d9r5865qbsovx0eo6gwlaiask Poster IMR]
<hr>


[https://odu.box.com/s/1sok1edideblq4nctbufg79vud0oiu8f NIA presentation (September 2018) ]  
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/dissertation/christos_dissertation.pdf Dissertation .pdf]


[[Internal:IMR_2018_Short_Course | IMR 2018 Short Course notes]]
[https://www.overleaf.com/6438559258mdmsnbpffztx speculative meshing operations using tasks paper - overleaf]


[https://www.overleaf.com/3459466599cnnfkhzmkczs Adaptive CDT3D paper - overleaf]


[https://www.overleaf.com/8242192311zntgrtsphkvv Parallel Grid Adaptation Paper (UGAWG) - overleaf  ]


[[Internal:ACDT3D_Scitech2018 | SciTech 2018]]
[[Internal:Adaptive_Meshing_For_APBNRR]]


[https://docs.google.com/presentation/d/1Fjt5PoDPXa715nOAjn0F4IJpdhscIGnlaQvweqFnB0U Adaptivity PPoSS slides]


[[Internal:Machine_Learning_CDT3D | Machine Learning and CDT3D]]
[https://docs.google.com/presentation/d/1RDtQufImuo5J1pKioIYDuTWCeX1UtjKyx7kQ2i24Tmo/edit?usp=sharing CNF HPC slides]


[[Internal:AIAA_2018_CDT3D | CDT3D AIAA Aviation Paper ]]


[[Internal:PODM4D_predicates | PODM4D fine grain concurrency benchmark ]]
[https://git-community.cs.odu.edu/nikos/SciTech_2019/blob/draft/main.pdf Scitech Journal paper latest draft]


[[Internal:AIAA_Geometry_and_Mesh_Generation_Workshop | Geometry and Mesh Generation Workshop ]]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/cand_exam.pdf Candidacy exam (document)]
[https://olddominion-my.sharepoint.com/:p:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy_presentation.pptx (presentation .pptx)]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy%20_presentation.pdf (presentation pdf)]


[[Internal:Adaptive_CDT3D_Results | Metric Adaptive CDT3D results]]


[[Internal:CDT3D_RoadMap |CDT3D RoadMap]]
[[Internal:Argobots_and_CDT3D | Argobots and CDT3D]]


[[Internal:Computational_Resources | High capacity Computational Resources ]]
[[Internal:4D_Predicates_Benchmark | 4D predicates benchmark]]


[[NDAM:Main | PODM 4D and Anisotropy ]]
[[CNF:Mesh Sizing for CNF data]]


[https://docs.google.com/document/d/1jzTiohDA51VHXc65tfIFkmjrKM_8yQn7YYj2txEyhyU MPI PDR.PODM 16,000 cores data and other]
[[Internal:ACDT3D        | Metric Adaptive CDT3D Notes ]]


== Kevin ==
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/paper.pdf Parallel Mesh Generation review paper]
[[Internal:PDR_AFLR |PDR.AFLR Stability and Scalability]]


[[Internal:PDR_AFLR_Progress_Report |PDR.AFLR Progress Report]]
[https://lbpw.larc.nasa.gov/ AIAA Sonic Boom Prediction Workshop (next in 2020)]


[[AFLR_Point_Spacing/Distribution_Function_Parameters | AFLR Point Spacing/Distribution Function Parameters]]
[[Internal:CDT3D_SU2 | SU2 and grid requirements ]]


[[Internal:PDR_AFLR_Performance_Testing |PDR.AFLR Performance Testing]]
[[Internal:Boundary_Layer_References | Boundary Layer References ]]


[[Internal:PDR_AFLR_Performance_AIAA |AIAA PDR.AFLR Performance Data]]
[[External:Mesh_Generation_Articles_In_Journals | Some Mesh Generation Journal papers]]


[[Internal:Report_Status |Report Status]]
[https://docs.google.com/document/d/1txyCu6ibheH19hi3nZ10LgHm-WzglUrT5y0AaO__VYk/edit?usp=sharing  PhD Tentative Shedule]


[[Internal:PsC_AFLR_Performance |PsC.AFLR Performance Data]]
[https://odu.box.com/s/sfkd5l3d9r5865qbsovx0eo6gwlaiask Poster IMR]


[[Internal:Next_Generation_Boundary_Layer |Next Generation Boundary Layer]]
[https://odu.box.com/s/1sok1edideblq4nctbufg79vud0oiu8f NIA presentation (September 2018) ]  


== Polykarpos ==
[[Internal:IMR_2018_Short_Course | IMR 2018 Short Course notes]]
[[PREMA Shared Memory]]


[[Internal:IMR_2018_Runtime_Systems | IMR 2018 Runtime Systems]]
[[Internal:ACDT3D_Scitech2018 | SciTech 2018]]


[[Intel Xeon Phi and High Bandwidth Memory]]
[[Internal:Machine_Learning_CDT3D |  Machine Learning and CDT3D]]


[[CNF:Machine_Learning | CNF Machine Learning Project]]
[[Internal:AIAA_2018_CDT3D | CDT3D AIAA Aviation Paper ]]


[[CNF:ML_Data_Denoise | Track denoising with ML]]
[[Internal:PODM4D_predicates | PODM4D fine grain concurrency benchmark ]]


[https://docs.google.com/presentation/d/1rF3rElnBCsKR_Z_66nTCmMqSZa3b51mEzswiLz_3d3Q/edit?usp=sharing  CNF HPC Workshop Slides]
[[Internal:AIAA_Geometry_and_Mesh_Generation_Workshop | Geometry and Mesh Generation Workshop ]]


[[PREMA SW4| SW4 Benchmark with PREMA]]
[[Internal:CDT3D_RoadMap |CDT3D RoadMap]]


[[PDR.PODM Distributed Memory| PDR.PODM.PREMA]]
[[Internal:Computational_Resources | High capacity Computational Resources ]]


[https://www.overleaf.com/read/vgwrypshrkqp PREMA-Argobots Paper]
[[NDAM:Main | PODM 4D and Anisotropy ]]


[https://olddominion-my.sharepoint.com/:b:/g/personal/pthom001_odu_edu/EYiL4h5xKThJgjyvbsFbZe4BH_4pr3rR-9x-gvErpDaq3A?e=hdy7ii Heterogeneousarchitecturesforcomputationalintensiveapplications:Acost-effectivenessanalysis]
[https://docs.google.com/document/d/1jzTiohDA51VHXc65tfIFkmjrKM_8yQn7YYj2txEyhyU MPI PDR.PODM 16,000 cores data and other]


Future Work


[[Internal:TAPAS]]


== Spiros ==
=== Spiros ===
'''Image-To-Mesh Conversion Projects'''
'''Image-To-Mesh Conversion Projects'''


Line 161: Line 181:


[[Internal:PODM_4D | PODM 4D]]
[[Internal:PODM_4D | PODM 4D]]


'''BioInformatics Projects'''
'''BioInformatics Projects'''
Line 167: Line 186:
[[Internal:GPCD | GPCD]]
[[Internal:GPCD | GPCD]]


'''Contrained Mesh Refinement Projects'''
[[Internal:CDT3D_GPU_Smoothing | CDT3D GPU Smoothing]]


'''CNF Related Projects'''
'''CNF Related Projects'''
Line 175: Line 197:


[[CNF:Smart_LookUp_Table_Utilities | Smart LookUp Table Utilities]]
[[CNF:Smart_LookUp_Table_Utilities | Smart LookUp Table Utilities]]
[[CNF:PartonsToNRRD | PartonsToNRRD]]


[[CNF:Weighted_Mesh_To_Image | Weighted Mesh To Image]]
[[CNF:Weighted_Mesh_To_Image | Weighted Mesh To Image]]


[[Internal:TetGen_CNF | TetGen CNF]]
[[Internal:TetGen_CNF | TetGen CNF]]


'''Utilities Projects'''
'''Utilities Projects'''
Line 195: Line 217:
[[Internal:GPU_Usage | GPU Usage]]
[[Internal:GPU_Usage | GPU Usage]]


=== Medical Imaging SubGroup (Eleni, Thomas , Angelos) ===
[[Internal:ReportCloud | Cloud Report]]
[[Internal:Preprocess_Medical_Images |  Preprocessing of Medical Images]]
[[Internal:Execution_And_Evaluation_Medical_Images |  Execution and Evaluation of Medical Imaging data]]
=== Joi ===
[[Tasks | Tasks ]]
[[I2M_Conversion_Tool | Image-to-Mesh (I2M) Conversion Tool]]
[[3D_Slicer_CBC3D_Extension | 3D Slicer CBC3D Extension ]]


'''Reports'''
'''Reports'''
Line 201: Line 237:


== General ==
== General ==
===Conference Slides ===
===Conference Slides ===
[https://odu.box.com/s/vev5nqudpd5yq143xfq99y7b8uyf0j4e AI in Nuclear Physics 2020]
[https://odu.box.com/s/vev5nqudpd5yq143xfq99y7b8uyf0j4e AI in Nuclear Physics 2020]
Line 239: Line 276:
* 2021.02.03 - Kevin & Spiros
* 2021.02.03 - Kevin & Spiros
:* Introduction to GPU Parallelism, [https://drive.google.com/file/d/1vW3VJXi04JB2N7XpVoNnXXSNv4i1Pnet/view?usp=sharing (presentation)]
:* Introduction to GPU Parallelism, [https://drive.google.com/file/d/1vW3VJXi04JB2N7XpVoNnXXSNv4i1Pnet/view?usp=sharing (presentation)]
* 2021.02.10 - Kevin & Spiros
:* GPU Architecture, [https://drive.google.com/file/d/1LfDwsbdscSpTk3eBT74lfIlSyD-W_Zwh/view?usp=sharing (presentation)]

Latest revision as of 13:39, 21 December 2024

Current Students

Polykarpos

PREMA Shared Memory

IMR 2018 Runtime Systems

Intel Xeon Phi and High Bandwidth Memory

CNF Machine Learning Project

Track denoising with ML

CNF HPC Workshop Slides

SW4 Benchmark with PREMA

PDR.PODM.PREMA

PREMA-Argobots Paper

Heterogeneousarchitecturesforcomputationalintensiveapplications:Acost-effectivenessanalysis

Internal:TAPAS

Kevin

Timetable/Primary Reports/Notes

PDR.AFLR Stability and Scalability

PDR.AFLR Progress Report

AFLR Point Spacing/Distribution Function Parameters

PDR.AFLR Performance Testing

AIAA PDR.AFLR Performance Data

Old Reports

PsC.AFLR Performance Data

Next Generation Boundary Layer

CDT3D GPU Smoothing

Distributed CDT3D Notes

Image-to-Mesh Conversion Project Notes

PREMA.CDT3D and PDR.PODM Experiences Data

Emmanuel

Quantum Information Science (QIS General)

Quantum Edge Detection

Hybrid Computing

Quantum Machine Learning

Quantum Natural Language Processing

Chris

Quantum Euclidean Distance (QDist)

Quantum Hausdorff Distance (QHD)

Quantum Edge Detection (QED)

Distributed Hadamard Quantum Edge Detection (DQHED)

Quantum Nested Expectation Maximization (QNEM)

Quantum Canny Edge Detection (QCED)

Quantum PDEs

Weekly Report

Devon

Quantum Clustering

Former Students

Angelos

GPCD

APBNRR Execution Status

Pristine vs New PAPBNRR

APBNRR Machine Learning

Slicer Extensions

Christos

All papers

All presentations


Dissertation .pdf

speculative meshing operations using tasks paper - overleaf

Adaptive CDT3D paper - overleaf

Parallel Grid Adaptation Paper (UGAWG) - overleaf

Internal:Adaptive_Meshing_For_APBNRR

Adaptivity PPoSS slides

CNF HPC slides


Scitech Journal paper latest draft

Candidacy exam (document) (presentation .pptx) (presentation pdf)

Metric Adaptive CDT3D results

Argobots and CDT3D

4D predicates benchmark

CNF:Mesh Sizing for CNF data

Metric Adaptive CDT3D Notes

Parallel Mesh Generation review paper

AIAA Sonic Boom Prediction Workshop (next in 2020)

SU2 and grid requirements

Boundary Layer References

Some Mesh Generation Journal papers

PhD Tentative Shedule

Poster IMR

NIA presentation (September 2018)

IMR 2018 Short Course notes

SciTech 2018

Machine Learning and CDT3D

CDT3D AIAA Aviation Paper

PODM4D fine grain concurrency benchmark

Geometry and Mesh Generation Workshop

CDT3D RoadMap

High capacity Computational Resources

PODM 4D and Anisotropy

MPI PDR.PODM 16,000 cores data and other


Spiros

Image-To-Mesh Conversion Projects

Tessellate 2D

PODM 3D

PODM 4D

BioInformatics Projects

GPCD

Contrained Mesh Refinement Projects

CDT3D GPU Smoothing

CNF Related Projects

CNF Data Generation

Monte Carlo Event Generator using a Tessellation

Smart LookUp Table Utilities

PartonsToNRRD

Weighted Mesh To Image

TetGen CNF

Utilities Projects

Synthetical Image Data Generator

MeshIO


Other Projects

PDM ND

GPU Usage

Medical Imaging SubGroup (Eleni, Thomas , Angelos)

Cloud Report

Preprocessing of Medical Images

Execution and Evaluation of Medical Imaging data


Joi

Tasks

Image-to-Mesh (I2M) Conversion Tool

3D Slicer CBC3D Extension

Reports

CNF Adaptivity

General

Conference Slides

AI in Nuclear Physics 2020

Proposal Resources

Internal:NSF_PPOSS_Funded_Proposals

Notes

Internal:CNF_Workshop

Internal:CNF_HPC_Workshop_2019

Internal:Kokkos_Tutorial_2020_02_19

Internal:Intel_OneAPI_Tutorial_2020_02_20

Papers

T-infinity: The Dependency Inversion Principle for Rapid and Sustainable Multidisciplinary Software Development

Meshless Voronoi on the GPU, Nicolas Ray,Dmitry Sokolov,Sylvain Lefebvre,Bruno Lévy

Democratizing Mesh Adaptation forComputational Fluid Dynamics Michael Park

Internal:Hashing_Meshes

Videos

Using Graphs for Unstructured Data (Keshav Pingali)

Big Data Brain Maps at Argonne National Laboratory (Bobby Kasthuri), ATPESC 2017

Other

http://livingreview.in.tum.de/welcome/

CRTC lab Virtual meetings

  • 2020.01.18 - Christos
  • 2021.02.03 - Kevin & Spiros
  • 2021.02.10 - Kevin & Spiros