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== Eleni, Thomas , Angelos==
== Current Students ==
[[Internal:ReportCloud | Cloud Report]]
 
=== Polykarpos ===
[[PREMA Shared Memory]]
 
[[Internal:IMR_2018_Runtime_Systems | IMR 2018 Runtime Systems]]
 
[[Intel Xeon Phi and High Bandwidth Memory]]
 
[[CNF:Machine_Learning | CNF Machine Learning Project]]


[[Internal:Preprocess_Medical_Images | Preprocessing of Medical Images]]
[[CNF:ML_Data_Denoise | Track denoising with ML]]


[[Internal:Execution_And_Evaluation_Medical_Images | Execution and Evaluation of Medical Imaging data]]
[https://docs.google.com/presentation/d/1rF3rElnBCsKR_Z_66nTCmMqSZa3b51mEzswiLz_3d3Q/edit?usp=sharing CNF HPC Workshop Slides]


== Angelos ==
[[PREMA SW4| SW4 Benchmark with PREMA]]


[[Internal:GPCD | GPCD]]
[[PDR.PODM Distributed Memory| PDR.PODM.PREMA]]


[[Internal:APBNRRExecutionStatus | APBNRR Execution Status]]
[https://www.overleaf.com/read/vgwrypshrkqp PREMA-Argobots Paper]


[[Internal:PAPBNRRComparison | Pristine vs New PAPBNRR]]
[https://olddominion-my.sharepoint.com/:b:/g/personal/pthom001_odu_edu/EYiL4h5xKThJgjyvbsFbZe4BH_4pr3rR-9x-gvErpDaq3A?e=hdy7ii Heterogeneousarchitecturesforcomputationalintensiveapplications:Acost-effectivenessanalysis]


[[Internal:APBNRRMachineLearning | APBNRR Machine Learning]]
[[Internal:TAPAS]]


[[Internal: SlicerExtensions | Slicer Extensions]]
=== Kevin ===
[[Internal:Weekly_Notes | Timetable/Primary Reports/Notes]]


== Joi ==
[[Internal:PDR_AFLR |PDR.AFLR Stability and Scalability]]
[[Tasks | Tasks ]]


[[I2M_Conversion_Tool | Image-to-Mesh (I2M) Conversion Tool]]
[[Internal:PDR_AFLR_Progress_Report |PDR.AFLR Progress Report]]


[[3D_Slicer_CBC3D_Extension | 3D Slicer CBC3D Extension ]]
[[AFLR_Point_Spacing/Distribution_Function_Parameters | AFLR Point Spacing/Distribution Function Parameters]]


== Christos ==
[[Internal:PDR_AFLR_Performance_Testing |PDR.AFLR Performance Testing]]
'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/Papers All papers]'''


'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/presentations All presentations]'''
[[Internal:PDR_AFLR_Performance_AIAA |AIAA PDR.AFLR Performance Data]]


<hr>
[[Internal:Report_Status |Old Reports]]
[https://www.overleaf.com/6438559258mdmsnbpffztx speculative meshing operations using tasks paper]


[https://olddominion-my.sharepoint.com/:b:/g/personal/nchrisoc_odu_edu/EXyZtFJEjdZV_0QJunWRbKkBvsleyOlNZFEMUB5Fbr7W2A Adaptive CDT3D paper]
[[Internal:PsC_AFLR_Performance |PsC.AFLR Performance Data]]


[https://odu.box.com/s/c7umodgo9dmknriap7820d0k5a1wkp7x Parallel Grid Adaptation Paper (UGAWG) ]
[[Internal:Next_Generation_Boundary_Layer |Next Generation Boundary Layer]]


[[Internal:Adaptive_Meshing_For_APBNRR]]
[[Internal:CDT3D_GPU_Smoothing | CDT3D GPU Smoothing]]
 
[[Internal:Distributed_CDT3D_Notes | Distributed CDT3D Notes]]


[[Internal:I2M_Notes | Image-to-Mesh Conversion Project Notes]]


[[Internal:Experiences_Data_CDT3D_PDR_PODM | PREMA.CDT3D and PDR.PODM Experiences Data]]


[https://docs.google.com/presentation/d/1Fjt5PoDPXa715nOAjn0F4IJpdhscIGnlaQvweqFnB0U Adaptivity PPoSS slides]
=== Emmanuel ===
[[Internal:Quantum Information Science (QIS General) |Quantum Information Science (QIS General)]]


[https://docs.google.com/presentation/d/1RDtQufImuo5J1pKioIYDuTWCeX1UtjKyx7kQ2i24Tmo/edit?usp=sharing  CNF HPC slides]
[[Internal:Quantum_Edge_Detection |Quantum Edge Detection]]


[[Internal:Hybrid Computing |Hybrid Computing]]


[https://git-community.cs.odu.edu/nikos/SciTech_2019/blob/draft/main.pdf Scitech Journal paper latest draft]
[[Internal:Quantum Machine Learning |Quantum Machine Learning]]


[[Internal:Quantum Natural Language Processing |Quantum Natural Language Processing]]


[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/cand_exam.pdf Candidacy exam (document)]
=== Chris ===
[https://olddominion-my.sharepoint.com/:p:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy_presentation.pptx  (presentation .pptx)]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy%20_presentation.pdf  (presentation pdf)]


[[Internal:Adaptive_CDT3D_Results | Metric Adaptive CDT3D results]]
[[Internal:QDist | Quantum Euclidean Distance (QDist)]]


[[Internal:Argobots_and_CDT3D | Argobots and CDT3D]]
[[Internal:QHD | Quantum Hausdorff Distance (QHD)]]


[[Internal:4D_Predicates_Benchmark | 4D predicates benchmark]]
[[Internal:QED | Quantum Edge Detection (QED)]]


[[CNF:Mesh Sizing for CNF data]]
[[Internal:DQHED |Distributed Hadamard Quantum Edge Detection (DQHED)]]


[[Internal:QNEM |Quantum Nested Expectation Maximization (QNEM)]]


[[Internal:QCED |Quantum Canny Edge Detection (QCED)]]


[[Internal:Quantum_PDEs |Quantum PDEs]]


[[Internal:ACDT3D        | Metric Adaptive CDT3D Notes ]]
[[Internal:weekly_report_rector |Weekly Report]]


=== Devon ===
[[Internal:Quantum_Clustering |Quantum Clustering]]


== Former Students ==


=== Angelos ===


[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/paper.pdf Parallel Mesh Generation review paper]
[[Internal:GPCD | GPCD]]


[[Internal:APBNRRExecutionStatus | APBNRR Execution Status]]


[https://lbpw.larc.nasa.gov/ AIAA Sonic Boom Prediction Workshop (next in 2020)]
[[Internal:PAPBNRRComparison | Pristine vs New PAPBNRR]]


[[Internal:CDT3D_SU2 | SU2 and grid requirements ]]
[[Internal:APBNRRMachineLearning | APBNRR Machine Learning]]


[[Internal:Boundary_Layer_References | Boundary Layer References ]]
[[Internal: SlicerExtensions | Slicer Extensions]]


[[External:Mesh_Generation_Articles_In_Journals | Some Mesh Generation Journal papers]]
=== Christos ===
'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/papers  All papers]'''


[https://docs.google.com/document/d/1txyCu6ibheH19hi3nZ10LgHm-WzglUrT5y0AaO__VYk/edit?usp=sharing  PhD Tentative Shedule]
'''[https://olddominion-my.sharepoint.com/:f:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/presentations All presentations]'''


<hr>


[https://odu.box.com/s/sfkd5l3d9r5865qbsovx0eo6gwlaiask Poster IMR]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/dissertation/christos_dissertation.pdf Dissertation .pdf]


[https://odu.box.com/s/1sok1edideblq4nctbufg79vud0oiu8f NIA presentation (September 2018) ]  
[https://www.overleaf.com/6438559258mdmsnbpffztx speculative meshing operations using tasks paper - overleaf]


[[Internal:IMR_2018_Short_Course | IMR 2018 Short Course notes]]
[https://www.overleaf.com/3459466599cnnfkhzmkczs Adaptive CDT3D paper - overleaf]


[https://www.overleaf.com/8242192311zntgrtsphkvv Parallel Grid Adaptation Paper (UGAWG) - overleaf  ]


[[Internal:Adaptive_Meshing_For_APBNRR]]


[[Internal:ACDT3D_Scitech2018 | SciTech 2018]]
[https://docs.google.com/presentation/d/1Fjt5PoDPXa715nOAjn0F4IJpdhscIGnlaQvweqFnB0U Adaptivity PPoSS slides]


[https://docs.google.com/presentation/d/1RDtQufImuo5J1pKioIYDuTWCeX1UtjKyx7kQ2i24Tmo/edit?usp=sharing  CNF HPC slides]


[[Internal:Machine_Learning_CDT3D |  Machine Learning and CDT3D]]


[[Internal:AIAA_2018_CDT3D | CDT3D AIAA Aviation Paper ]]
[https://git-community.cs.odu.edu/nikos/SciTech_2019/blob/draft/main.pdf Scitech Journal paper latest draft]


[[Internal:PODM4D_predicates | PODM4D fine grain concurrency benchmark ]]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/cand_exam.pdf Candidacy exam (document)]
[https://olddominion-my.sharepoint.com/:p:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy_presentation.pptx (presentation .pptx)]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/From_Box/CRTC_Students/ChristosT/candidacy_exam/PhD_Candidacy%20_presentation.pdf (presentation pdf)]


[[Internal:AIAA_Geometry_and_Mesh_Generation_Workshop | Geometry and Mesh Generation Workshop ]]
[[Internal:Adaptive_CDT3D_Results | Metric Adaptive CDT3D results]]


[[Internal:Argobots_and_CDT3D | Argobots and CDT3D]]


[[Internal:CDT3D_RoadMap |CDT3D RoadMap]]
[[Internal:4D_Predicates_Benchmark | 4D predicates benchmark]]


[[Internal:Computational_Resources | High capacity Computational Resources ]]
[[CNF:Mesh Sizing for CNF data]]


[[NDAM:Main | PODM 4D and Anisotropy ]]
[[Internal:ACDT3D        | Metric Adaptive CDT3D Notes ]]


[https://docs.google.com/document/d/1jzTiohDA51VHXc65tfIFkmjrKM_8yQn7YYj2txEyhyU MPI PDR.PODM 16,000 cores data and other]
[https://olddominion-my.sharepoint.com/:b:/r/personal/nchrisoc_odu_edu/Documents/frombox/CRTC_Students/ChristosT/candidacy_exam/paper.pdf Parallel Mesh Generation review paper]


== Kevin ==
[https://lbpw.larc.nasa.gov/ AIAA Sonic Boom Prediction Workshop (next in 2020)]
[[Internal:PDR_AFLR |PDR.AFLR Stability and Scalability]]


[[Internal:PDR_AFLR_Progress_Report |PDR.AFLR Progress Report]]
[[Internal:CDT3D_SU2 | SU2 and grid requirements ]]


[[AFLR_Point_Spacing/Distribution_Function_Parameters | AFLR Point Spacing/Distribution Function Parameters]]
[[Internal:Boundary_Layer_References | Boundary Layer References ]]


[[Internal:PDR_AFLR_Performance_Testing |PDR.AFLR Performance Testing]]
[[External:Mesh_Generation_Articles_In_Journals | Some Mesh Generation Journal papers]]


[[Internal:PDR_AFLR_Performance_AIAA |AIAA PDR.AFLR Performance Data]]
[https://docs.google.com/document/d/1txyCu6ibheH19hi3nZ10LgHm-WzglUrT5y0AaO__VYk/edit?usp=sharing  PhD Tentative Shedule]


[[Internal:Report_Status |Report Status]]
[https://odu.box.com/s/sfkd5l3d9r5865qbsovx0eo6gwlaiask Poster IMR]


[[Internal:PsC_AFLR_Performance |PsC.AFLR Performance Data]]
[https://odu.box.com/s/1sok1edideblq4nctbufg79vud0oiu8f NIA presentation (September 2018) ]  


[[Internal:Next_Generation_Boundary_Layer |Next Generation Boundary Layer]]
[[Internal:IMR_2018_Short_Course | IMR 2018 Short Course notes]]


== Polykarpos ==
[[Internal:ACDT3D_Scitech2018 | SciTech 2018]]
[[PREMA Shared Memory]]


[[Internal:IMR_2018_Runtime_Systems | IMR 2018 Runtime Systems]]
[[Internal:Machine_Learning_CDT3D | Machine Learning and CDT3D]]


[[Intel Xeon Phi and High Bandwidth Memory]]
[[Internal:AIAA_2018_CDT3D | CDT3D AIAA Aviation Paper ]]


[[CNF:Machine_Learning | CNF Machine Learning Project]]
[[Internal:PODM4D_predicates | PODM4D fine grain concurrency benchmark ]]


[[CNF:ML_Data_Denoise | Track denoising with ML]]
[[Internal:AIAA_Geometry_and_Mesh_Generation_Workshop | Geometry and Mesh Generation Workshop ]]


[https://docs.google.com/presentation/d/1rF3rElnBCsKR_Z_66nTCmMqSZa3b51mEzswiLz_3d3Q/edit?usp=sharing  CNF HPC Workshop Slides]
[[Internal:CDT3D_RoadMap |CDT3D RoadMap]]


[[PREMA SW4| SW4 Benchmark with PREMA]]
[[Internal:Computational_Resources | High capacity Computational Resources ]]


[[PDR.PODM Distributed Memory| PDR.PODM.PREMA]]
[[NDAM:Main | PODM 4D and Anisotropy ]]


[https://www.overleaf.com/read/vgwrypshrkqp PREMA-Argobots Paper]
[https://docs.google.com/document/d/1jzTiohDA51VHXc65tfIFkmjrKM_8yQn7YYj2txEyhyU MPI PDR.PODM 16,000 cores data and other]


Future Work


[[Internal:TAPAS]]


== Spiros ==
=== Spiros ===
'''Image-To-Mesh Conversion Projects'''
'''Image-To-Mesh Conversion Projects'''


Line 159: Line 181:


[[Internal:PODM_4D | PODM 4D]]
[[Internal:PODM_4D | PODM 4D]]


'''BioInformatics Projects'''
'''BioInformatics Projects'''
Line 165: Line 186:
[[Internal:GPCD | GPCD]]
[[Internal:GPCD | GPCD]]


'''Contrained Mesh Refinement Projects'''
[[Internal:CDT3D_GPU_Smoothing | CDT3D GPU Smoothing]]


'''CNF Related Projects'''
'''CNF Related Projects'''
Line 173: Line 197:


[[CNF:Smart_LookUp_Table_Utilities | Smart LookUp Table Utilities]]
[[CNF:Smart_LookUp_Table_Utilities | Smart LookUp Table Utilities]]
[[CNF:PartonsToNRRD | PartonsToNRRD]]


[[CNF:Weighted_Mesh_To_Image | Weighted Mesh To Image]]
[[CNF:Weighted_Mesh_To_Image | Weighted Mesh To Image]]


[[Internal:TetGen_CNF | TetGen CNF]]
[[Internal:TetGen_CNF | TetGen CNF]]


'''Utilities Projects'''
'''Utilities Projects'''
Line 193: Line 217:
[[Internal:GPU_Usage | GPU Usage]]
[[Internal:GPU_Usage | GPU Usage]]


=== Medical Imaging SubGroup (Eleni, Thomas , Angelos) ===
[[Internal:ReportCloud | Cloud Report]]
[[Internal:Preprocess_Medical_Images |  Preprocessing of Medical Images]]
[[Internal:Execution_And_Evaluation_Medical_Images |  Execution and Evaluation of Medical Imaging data]]
=== Joi ===
[[Tasks | Tasks ]]
[[I2M_Conversion_Tool | Image-to-Mesh (I2M) Conversion Tool]]
[[3D_Slicer_CBC3D_Extension | 3D Slicer CBC3D Extension ]]


'''Reports'''
'''Reports'''
Line 199: Line 237:


== General ==
== General ==
===Conference Slides ===
===Conference Slides ===
[https://odu.box.com/s/vev5nqudpd5yq143xfq99y7b8uyf0j4e AI in Nuclear Physics 2020]
[https://odu.box.com/s/vev5nqudpd5yq143xfq99y7b8uyf0j4e AI in Nuclear Physics 2020]
Line 237: Line 276:
* 2021.02.03 - Kevin & Spiros
* 2021.02.03 - Kevin & Spiros
:* Introduction to GPU Parallelism, [https://drive.google.com/file/d/1vW3VJXi04JB2N7XpVoNnXXSNv4i1Pnet/view?usp=sharing (presentation)]
:* Introduction to GPU Parallelism, [https://drive.google.com/file/d/1vW3VJXi04JB2N7XpVoNnXXSNv4i1Pnet/view?usp=sharing (presentation)]
* 2021.02.10 - Kevin & Spiros
:* GPU Architecture, [https://drive.google.com/file/d/1LfDwsbdscSpTk3eBT74lfIlSyD-W_Zwh/view?usp=sharing (presentation)]

Latest revision as of 13:39, 21 December 2024

Current Students

Polykarpos

PREMA Shared Memory

IMR 2018 Runtime Systems

Intel Xeon Phi and High Bandwidth Memory

CNF Machine Learning Project

Track denoising with ML

CNF HPC Workshop Slides

SW4 Benchmark with PREMA

PDR.PODM.PREMA

PREMA-Argobots Paper

Heterogeneousarchitecturesforcomputationalintensiveapplications:Acost-effectivenessanalysis

Internal:TAPAS

Kevin

Timetable/Primary Reports/Notes

PDR.AFLR Stability and Scalability

PDR.AFLR Progress Report

AFLR Point Spacing/Distribution Function Parameters

PDR.AFLR Performance Testing

AIAA PDR.AFLR Performance Data

Old Reports

PsC.AFLR Performance Data

Next Generation Boundary Layer

CDT3D GPU Smoothing

Distributed CDT3D Notes

Image-to-Mesh Conversion Project Notes

PREMA.CDT3D and PDR.PODM Experiences Data

Emmanuel

Quantum Information Science (QIS General)

Quantum Edge Detection

Hybrid Computing

Quantum Machine Learning

Quantum Natural Language Processing

Chris

Quantum Euclidean Distance (QDist)

Quantum Hausdorff Distance (QHD)

Quantum Edge Detection (QED)

Distributed Hadamard Quantum Edge Detection (DQHED)

Quantum Nested Expectation Maximization (QNEM)

Quantum Canny Edge Detection (QCED)

Quantum PDEs

Weekly Report

Devon

Quantum Clustering

Former Students

Angelos

GPCD

APBNRR Execution Status

Pristine vs New PAPBNRR

APBNRR Machine Learning

Slicer Extensions

Christos

All papers

All presentations


Dissertation .pdf

speculative meshing operations using tasks paper - overleaf

Adaptive CDT3D paper - overleaf

Parallel Grid Adaptation Paper (UGAWG) - overleaf

Internal:Adaptive_Meshing_For_APBNRR

Adaptivity PPoSS slides

CNF HPC slides


Scitech Journal paper latest draft

Candidacy exam (document) (presentation .pptx) (presentation pdf)

Metric Adaptive CDT3D results

Argobots and CDT3D

4D predicates benchmark

CNF:Mesh Sizing for CNF data

Metric Adaptive CDT3D Notes

Parallel Mesh Generation review paper

AIAA Sonic Boom Prediction Workshop (next in 2020)

SU2 and grid requirements

Boundary Layer References

Some Mesh Generation Journal papers

PhD Tentative Shedule

Poster IMR

NIA presentation (September 2018)

IMR 2018 Short Course notes

SciTech 2018

Machine Learning and CDT3D

CDT3D AIAA Aviation Paper

PODM4D fine grain concurrency benchmark

Geometry and Mesh Generation Workshop

CDT3D RoadMap

High capacity Computational Resources

PODM 4D and Anisotropy

MPI PDR.PODM 16,000 cores data and other


Spiros

Image-To-Mesh Conversion Projects

Tessellate 2D

PODM 3D

PODM 4D

BioInformatics Projects

GPCD

Contrained Mesh Refinement Projects

CDT3D GPU Smoothing

CNF Related Projects

CNF Data Generation

Monte Carlo Event Generator using a Tessellation

Smart LookUp Table Utilities

PartonsToNRRD

Weighted Mesh To Image

TetGen CNF

Utilities Projects

Synthetical Image Data Generator

MeshIO


Other Projects

PDM ND

GPU Usage

Medical Imaging SubGroup (Eleni, Thomas , Angelos)

Cloud Report

Preprocessing of Medical Images

Execution and Evaluation of Medical Imaging data


Joi

Tasks

Image-to-Mesh (I2M) Conversion Tool

3D Slicer CBC3D Extension

Reports

CNF Adaptivity

General

Conference Slides

AI in Nuclear Physics 2020

Proposal Resources

Internal:NSF_PPOSS_Funded_Proposals

Notes

Internal:CNF_Workshop

Internal:CNF_HPC_Workshop_2019

Internal:Kokkos_Tutorial_2020_02_19

Internal:Intel_OneAPI_Tutorial_2020_02_20

Papers

T-infinity: The Dependency Inversion Principle for Rapid and Sustainable Multidisciplinary Software Development

Meshless Voronoi on the GPU, Nicolas Ray,Dmitry Sokolov,Sylvain Lefebvre,Bruno Lévy

Democratizing Mesh Adaptation forComputational Fluid Dynamics Michael Park

Internal:Hashing_Meshes

Videos

Using Graphs for Unstructured Data (Keshav Pingali)

Big Data Brain Maps at Argonne National Laboratory (Bobby Kasthuri), ATPESC 2017

Other

http://livingreview.in.tum.de/welcome/

CRTC lab Virtual meetings

  • 2020.01.18 - Christos
  • 2021.02.03 - Kevin & Spiros
  • 2021.02.10 - Kevin & Spiros